Draft genome sequence of Cylindrospermopsis raciborskii (cyanobacteria) strain ITEP-A1 isolated from a Brazilian semiarid freshwater body: Evidence of saxitoxin and cylindrospermopsin synthetase genes

Adriana Sturion Lorenzi; Genivaldo Gueiros Z. Silva; Fabyano Alvares Cardoso Lopes; Mathias Ahii Chia; Robert A. Edwards; Maria Carmo Bittencourt-Oliveira

doi:10.1128/genomeA.00228-16

Draft genome sequence of Cylindrospermopsis raciborskii (cyanobacteria) strain ITEP-A1 isolated from a Brazilian semiarid freshwater body: Evidence of saxitoxin and cylindrospermopsin synthetase genes

Adriana Sturion Lorenzi
, Genivaldo Gueiros Z. Silva
, Fabyano Alvares Cardoso Lopes
, Mathias Ahii Chia
, Robert A. Edwards
, Maria Carmo Bittencourt-Oliveira

Research output: Contribution to journal › Article › peer-review

7 Citations (Scopus)

52 Downloads (Pure)

Abstract

Cylindrospermopsis raciborskii ITEP-A1 is a saxitoxin-producing cyanobacterium. We report the draft genome sequence of ITEP-A1, which comprised 195 contigs that were assembled with SPAdes and annotated with Rapid Annotation using Subsystem Technology. The identified genome sequence had 3,605,836 bp, 40.1% G+C, and predicted 3,553 coding sequences (including the synthetase genes).

Original language	English
Article number	e00228-16
Number of pages	2
Journal	Genome Announcements
Volume	4
Issue number	3
DOIs	https://doi.org/10.1128/genomeA.00228-16
Publication status	Published - 2016
Externally published	Yes

Bibliographical note

This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

SDG 14 Life Below Water

Keywords

Genome Sequence
Cylindrospermopsis raciborskii
Cyanobacteria

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10.1128/genomeA.00228-16Licence: CC BY

Lorenzi_Draft_P2016Final published version, 146 KBLicence: CC BY

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Lorenzi, A. S., Silva, G. G. Z., Lopes, F. A. C., Chia, M. A., Edwards, R. A., & Bittencourt-Oliveira, M. C. (2016). Draft genome sequence of Cylindrospermopsis raciborskii (cyanobacteria) strain ITEP-A1 isolated from a Brazilian semiarid freshwater body: Evidence of saxitoxin and cylindrospermopsin synthetase genes. Genome Announcements, 4(3), Article e00228-16. https://doi.org/10.1128/genomeA.00228-16

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title = "Draft genome sequence of Cylindrospermopsis raciborskii (cyanobacteria) strain ITEP-A1 isolated from a Brazilian semiarid freshwater body: Evidence of saxitoxin and cylindrospermopsin synthetase genes",

abstract = "Cylindrospermopsis raciborskii ITEP-A1 is a saxitoxin-producing cyanobacterium. We report the draft genome sequence of ITEP-A1, which comprised 195 contigs that were assembled with SPAdes and annotated with Rapid Annotation using Subsystem Technology. The identified genome sequence had 3,605,836 bp, 40.1\% G+C, and predicted 3,553 coding sequences (including the synthetase genes).",

keywords = "Genome Sequence, Cylindrospermopsis raciborskii, Cyanobacteria",

author = "Lorenzi, \{Adriana Sturion\} and Silva, \{Genivaldo Gueiros Z.\} and Lopes, \{Fabyano Alvares Cardoso\} and Chia, \{Mathias Ahii\} and Edwards, \{Robert A.\} and Bittencourt-Oliveira, \{Maria Carmo\}",

note = "This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license",

year = "2016",

doi = "10.1128/genomeA.00228-16",

language = "English",

volume = "4",

journal = "Genome Announcements",

issn = "2169-8287",

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number = "3",

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Lorenzi, AS, Silva, GGZ, Lopes, FAC, Chia, MA, Edwards, RA & Bittencourt-Oliveira, MC 2016, 'Draft genome sequence of Cylindrospermopsis raciborskii (cyanobacteria) strain ITEP-A1 isolated from a Brazilian semiarid freshwater body: Evidence of saxitoxin and cylindrospermopsin synthetase genes', Genome Announcements, vol. 4, no. 3, e00228-16. https://doi.org/10.1128/genomeA.00228-16

Draft genome sequence of Cylindrospermopsis raciborskii (cyanobacteria) strain ITEP-A1 isolated from a Brazilian semiarid freshwater body: Evidence of saxitoxin and cylindrospermopsin synthetase genes. / Lorenzi, Adriana Sturion; Silva, Genivaldo Gueiros Z.; Lopes, Fabyano Alvares Cardoso et al.
In: Genome Announcements, Vol. 4, No. 3, e00228-16, 2016.

Research output: Contribution to journal › Article › peer-review

TY - JOUR

T1 - Draft genome sequence of Cylindrospermopsis raciborskii (cyanobacteria) strain ITEP-A1 isolated from a Brazilian semiarid freshwater body

T2 - Evidence of saxitoxin and cylindrospermopsin synthetase genes

AU - Lorenzi, Adriana Sturion

AU - Silva, Genivaldo Gueiros Z.

AU - Lopes, Fabyano Alvares Cardoso

AU - Chia, Mathias Ahii

AU - Edwards, Robert A.

AU - Bittencourt-Oliveira, Maria Carmo

N1 - This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license

PY - 2016

Y1 - 2016

N2 - Cylindrospermopsis raciborskii ITEP-A1 is a saxitoxin-producing cyanobacterium. We report the draft genome sequence of ITEP-A1, which comprised 195 contigs that were assembled with SPAdes and annotated with Rapid Annotation using Subsystem Technology. The identified genome sequence had 3,605,836 bp, 40.1% G+C, and predicted 3,553 coding sequences (including the synthetase genes).

AB - Cylindrospermopsis raciborskii ITEP-A1 is a saxitoxin-producing cyanobacterium. We report the draft genome sequence of ITEP-A1, which comprised 195 contigs that were assembled with SPAdes and annotated with Rapid Annotation using Subsystem Technology. The identified genome sequence had 3,605,836 bp, 40.1% G+C, and predicted 3,553 coding sequences (including the synthetase genes).

KW - Genome Sequence

KW - Cylindrospermopsis raciborskii

KW - Cyanobacteria

UR - https://www.scopus.com/pages/publications/85009948999

U2 - 10.1128/genomeA.00228-16

DO - 10.1128/genomeA.00228-16

M3 - Article

AN - SCOPUS:85009948999

SN - 2169-8287

VL - 4

JO - Genome Announcements

JF - Genome Announcements

IS - 3

M1 - e00228-16

ER -

Draft genome sequence of Cylindrospermopsis raciborskii (cyanobacteria) strain ITEP-A1 isolated from a Brazilian semiarid freshwater body: Evidence of saxitoxin and cylindrospermopsin synthetase genes

Abstract

Bibliographical note

UN SDGs

Keywords

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