Organs-at-risk contouring on head CT for RT planning using 3D slicer-A preliminary study

Nolwenn Jegou; Franck Desaize; Gobert Lee; Mariusz Bajger; Oscar Acosta; Julie Leseur; Renaud De Crevoisier; Martin Caon

doi:10.1109/BIBE.2019.00097

Organs-at-risk contouring on head CT for RT planning using 3D slicer-A preliminary study

Nolwenn Jegou, Franck Desaize, Gobert Lee, Mariusz Bajger, Oscar Acosta, Julie Leseur, Renaud De Crevoisier, Martin Caon

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

5 Citations (Scopus)

Abstract

In radiotherapy, computed tomography (CT) images are typically used for radiation treatment planning. Accurate segmentation of radiation sensitive healthy tissues, organs-atrisk (OARs), is important for radiation treatment planning for brain tumor. 3D Slicer has been applied in many medical applications including tumor segmentation on head MR images. However, to the best of our knowledge, there have been no studies using 3D Slicer for segmenting OARs on head CT images. This preliminary study evaluates the segmentation of seven OARs on head CTs using 3D Slicer. Results are comparable to state-ofthe- art approaches but a larger dataset is required to verify the results.

Original language	English
Title of host publication	Proceedings - 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019
Place of Publication	Piscataway, NJ
Publisher	Institute of Electrical and Electronics Engineers
Pages	503-506
Number of pages	4
ISBN (Electronic)	9781728146171
DOIs	https://doi.org/10.1109/BIBE.2019.00097
Publication status	Published - Oct 2019
Event	19th International Conference on Bioinformatics and Bioengineering, BIBE 2019 - Athens, Greece Duration: 28 Oct 2019 → 30 Oct 2019

Publication series

Name	Proceedings - 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019

Conference

Conference	19th International Conference on Bioinformatics and Bioengineering, BIBE 2019
Country/Territory	Greece
City	Athens
Period	28/10/19 → 30/10/19

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

SDG 3 Good Health and Well-being

Keywords

3D-Slicer
Brain-Tumor
Computed-tomography-(CT)
Glioblastoma
Organ-at-risk
Radiotherapy
RT-planning
Segmentation

Access to Document

10.1109/BIBE.2019.00097Licence: In Copyright

Cite this

Jegou, N., Desaize, F., Lee, G., Bajger, M., Acosta, O., Leseur, J., De Crevoisier, R., & Caon, M. (2019). Organs-at-risk contouring on head CT for RT planning using 3D slicer-A preliminary study. In Proceedings - 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019 (pp. 503-506). Article 8941631 (Proceedings - 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019). Institute of Electrical and Electronics Engineers. https://doi.org/10.1109/BIBE.2019.00097

Jegou, Nolwenn ; Desaize, Franck ; Lee, Gobert et al. / Organs-at-risk contouring on head CT for RT planning using 3D slicer-A preliminary study. Proceedings - 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019. Piscataway, NJ : Institute of Electrical and Electronics Engineers, 2019. pp. 503-506 (Proceedings - 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019).

@inproceedings{f78154ef7aea4b3fbe6a963feb959ca9,

title = "Organs-at-risk contouring on head CT for RT planning using 3D slicer-A preliminary study",

abstract = "In radiotherapy, computed tomography (CT) images are typically used for radiation treatment planning. Accurate segmentation of radiation sensitive healthy tissues, organs-atrisk (OARs), is important for radiation treatment planning for brain tumor. 3D Slicer has been applied in many medical applications including tumor segmentation on head MR images. However, to the best of our knowledge, there have been no studies using 3D Slicer for segmenting OARs on head CT images. This preliminary study evaluates the segmentation of seven OARs on head CTs using 3D Slicer. Results are comparable to state-ofthe- art approaches but a larger dataset is required to verify the results.",

keywords = "3D-Slicer, Brain-Tumor, Computed-tomography-(CT), Glioblastoma, Organ-at-risk, Radiotherapy, RT-planning, Segmentation",

author = "Nolwenn Jegou and Franck Desaize and Gobert Lee and Mariusz Bajger and Oscar Acosta and Julie Leseur and {De Crevoisier}, Renaud and Martin Caon",

year = "2019",

month = oct,

doi = "10.1109/BIBE.2019.00097",

language = "English",

series = "Proceedings - 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019",

publisher = "Institute of Electrical and Electronics Engineers",

pages = "503--506",

booktitle = "Proceedings - 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019",

address = "United States",

note = "19th International Conference on Bioinformatics and Bioengineering, BIBE 2019 ; Conference date: 28-10-2019 Through 30-10-2019",

}

Jegou, N, Desaize, F, Lee, G , Bajger, M, Acosta, O, Leseur, J, De Crevoisier, R & Caon, M 2019, Organs-at-risk contouring on head CT for RT planning using 3D slicer-A preliminary study. in Proceedings - 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019., 8941631, Proceedings - 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019, Institute of Electrical and Electronics Engineers, Piscataway, NJ, pp. 503-506, 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019, Athens, Greece, 28/10/19. https://doi.org/10.1109/BIBE.2019.00097

Organs-at-risk contouring on head CT for RT planning using 3D slicer-A preliminary study. / Jegou, Nolwenn; Desaize, Franck; Lee, Gobert et al.
Proceedings - 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019. Piscataway, NJ: Institute of Electrical and Electronics Engineers, 2019. p. 503-506 8941631 (Proceedings - 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

TY - GEN

T1 - Organs-at-risk contouring on head CT for RT planning using 3D slicer-A preliminary study

AU - Jegou, Nolwenn

AU - Desaize, Franck

AU - Lee, Gobert

AU - Bajger, Mariusz

AU - Acosta, Oscar

AU - Leseur, Julie

AU - De Crevoisier, Renaud

AU - Caon, Martin

PY - 2019/10

Y1 - 2019/10

N2 - In radiotherapy, computed tomography (CT) images are typically used for radiation treatment planning. Accurate segmentation of radiation sensitive healthy tissues, organs-atrisk (OARs), is important for radiation treatment planning for brain tumor. 3D Slicer has been applied in many medical applications including tumor segmentation on head MR images. However, to the best of our knowledge, there have been no studies using 3D Slicer for segmenting OARs on head CT images. This preliminary study evaluates the segmentation of seven OARs on head CTs using 3D Slicer. Results are comparable to state-ofthe- art approaches but a larger dataset is required to verify the results.

AB - In radiotherapy, computed tomography (CT) images are typically used for radiation treatment planning. Accurate segmentation of radiation sensitive healthy tissues, organs-atrisk (OARs), is important for radiation treatment planning for brain tumor. 3D Slicer has been applied in many medical applications including tumor segmentation on head MR images. However, to the best of our knowledge, there have been no studies using 3D Slicer for segmenting OARs on head CT images. This preliminary study evaluates the segmentation of seven OARs on head CTs using 3D Slicer. Results are comparable to state-ofthe- art approaches but a larger dataset is required to verify the results.

KW - 3D-Slicer

KW - Brain-Tumor

KW - Computed-tomography-(CT)

KW - Glioblastoma

KW - Organ-at-risk

KW - Radiotherapy

KW - RT-planning

KW - Segmentation

UR - http://www.scopus.com/inward/record.url?scp=85078016698&partnerID=8YFLogxK

U2 - 10.1109/BIBE.2019.00097

DO - 10.1109/BIBE.2019.00097

M3 - Conference contribution

T3 - Proceedings - 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019

SP - 503

EP - 506

BT - Proceedings - 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019

PB - Institute of Electrical and Electronics Engineers

CY - Piscataway, NJ

T2 - 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019

Y2 - 28 October 2019 through 30 October 2019

ER -

Jegou N, Desaize F, Lee G , Bajger M, Acosta O, Leseur J et al. Organs-at-risk contouring on head CT for RT planning using 3D slicer-A preliminary study. In Proceedings - 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019. Piscataway, NJ: Institute of Electrical and Electronics Engineers. 2019. p. 503-506. 8941631. (Proceedings - 2019 IEEE 19th International Conference on Bioinformatics and Bioengineering, BIBE 2019). doi: 10.1109/BIBE.2019.00097

Organs-at-risk contouring on head CT for RT planning using 3D slicer-A preliminary study

Abstract

Publication series

Conference

UN SDGs

Keywords

Access to Document

Other files and links

Fingerprint

Cite this