Vini2/reneo:: reneo 0.2.0

Vijini Mallawaarachchi

doi:10.5281/zenodo.8263066

Vini2/reneo: reneo 0.2.0

Vijini Mallawaarachchi (Developer)

College of Science and Engineering

Research output: Non-textual form › Software

Abstract

Reneo means to unravel or untangle in latin. Reneo is a software developed to unravel or untangle high-quality genomes from viral communities (including both prokaryotic and eukaryotic viruses) found within metagenomes using assembly graphs. Reneo identifies cyclic viral components in the metagenomic assembly using virus orthologous groups from VOGDB, models as flow networks and solves a minimum flow decomposition (MFD) problem to resolve genomic paths.

Original language	English
Publisher	Zenodo
Edition	Version v0.2.0
Media of output	Online
Size	46.7 kB
DOIs	https://doi.org/10.5281/zenodo.8263066
Publication status	Published - 18 Aug 2023

Keywords

bioinformatics
metagenomics
viruses
assembly-graphs
Software

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10.5281/zenodo.8263066Licence: CC BY

https://github.com/Vini2/reneoLicence: CC BY

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Vini2/reneo: reneo 0.2.0

Abstract

Keywords

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