TY - JOUR
T1 - Whole Exome Sequencing of Extreme Morbid Obesity Patients: Translational Implications for Obesity and Related Disorders
AU - Paz-Filho, Gilberto
AU - Boguszewski, Margaret
AU - Mastronardi, Claudio
AU - Patel, Hardip
AU - Johar, Angad
AU - Chuah, Aaron
AU - Huttley, Gavin
AU - Boguszewski, Cesar
AU - Wong, Ma-Li
AU - Arcos-Burgos, Mauricio
AU - Licinio, Julio
PY - 2014/8/25
Y1 - 2014/8/25
N2 - Whole-exome sequencing (WES) is a new tool that allows the rapid, inexpensive and accurate exploration of Mendelian and complex diseases, such as obesity. To identify sequence variants associated with obesity, we performed WES of family trios of one male teenager and one female child with severe early-onset obesity. Additionally, the teenager patient had hypopituitarism and hyperprolactinaemia. A comprehensive bioinformatics analysis found de novo and compound heterozygote sequence variants with a damaging effect on genes previously associated with obesity in mice (LRP2) and humans (UCP2), among other intriguing mutations affecting ciliary function (DNAAF1). A gene ontology and pathway analysis of genes harbouring mutations resulted in the significant identification of overrepresented pathways related to ATP/ITP (adenosine/inosine triphosphate) metabolism and, in general, to the regulation of lipid metabolism. We discuss the clinical and physiological consequences of these mutations and the importance of these findings for either the clinical assessment or eventual treatment of morbid obesity.
AB - Whole-exome sequencing (WES) is a new tool that allows the rapid, inexpensive and accurate exploration of Mendelian and complex diseases, such as obesity. To identify sequence variants associated with obesity, we performed WES of family trios of one male teenager and one female child with severe early-onset obesity. Additionally, the teenager patient had hypopituitarism and hyperprolactinaemia. A comprehensive bioinformatics analysis found de novo and compound heterozygote sequence variants with a damaging effect on genes previously associated with obesity in mice (LRP2) and humans (UCP2), among other intriguing mutations affecting ciliary function (DNAAF1). A gene ontology and pathway analysis of genes harbouring mutations resulted in the significant identification of overrepresented pathways related to ATP/ITP (adenosine/inosine triphosphate) metabolism and, in general, to the regulation of lipid metabolism. We discuss the clinical and physiological consequences of these mutations and the importance of these findings for either the clinical assessment or eventual treatment of morbid obesity.
KW - DNAAF1
KW - Genetics
KW - Leptin-melanocortin
KW - LRP2
KW - Megalin
KW - Monogenic
KW - Obesity
KW - Pituitary
KW - UCP2
KW - Whole-exome sequencing
UR - http://www.scopus.com/inward/record.url?scp=84921029160&partnerID=8YFLogxK
U2 - 10.3390/genes5030709
DO - 10.3390/genes5030709
M3 - Article
SN - 2073-4425
VL - 5
SP - 709
EP - 725
JO - Genes
JF - Genes
IS - 3
ER -